Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC104506.1-201ENST00000609247 429 ntBASIC14.24□□□□□ -0.13
VCLP18206 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.24□□□□□ -0.13
VCLP18206 AL139099.5-201ENST00000635274 300 ntBASIC14.24□□□□□ -0.13
VCLP18206 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.24□□□□□ -0.13
VCLP18206 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.24□□□□□ -0.13
VCLP18206 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCLP18206 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 MIR497HG-202ENST00000572453 3838 ntBASIC14.23□□□□□ -0.13
VCLP18206 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.23□□□□□ -0.13
VCLP18206 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.23□□□□□ -0.13
VCLP18206 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.23□□□□□ -0.13
VCLP18206 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.23□□□□□ -0.13
VCLP18206 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VCLP18206 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.23□□□□□ -0.13
VCLP18206 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.23□□□□□ -0.13
VCLP18206 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
VCLP18206 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.23□□□□□ -0.13
VCLP18206 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.23□□□□□ -0.13
VCLP18206 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 BCYRN1-201ENST00000418539 200 ntBASIC14.23□□□□□ -0.13
VCLP18206 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.23□□□□□ -0.13
VCLP18206 RN7SL11P-201ENST00000471305 293 ntBASIC14.23□□□□□ -0.13
VCLP18206 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 HIST2H2BC-201ENST00000498492 580 ntBASIC14.23□□□□□ -0.13
VCLP18206 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.23□□□□□ -0.13
VCLP18206 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.23□□□□□ -0.13
VCLP18206 AC003686.1-201ENST00000550956 1034 ntBASIC14.23□□□□□ -0.13
VCLP18206 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VCLP18206 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.23□□□□□ -0.13
VCLP18206 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.23□□□□□ -0.13
VCLP18206 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VCLP18206 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.23□□□□□ -0.13
VCLP18206 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.23□□□□□ -0.13
VCLP18206 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.23□□□□□ -0.13
VCLP18206 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.23□□□□□ -0.13
VCLP18206 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 AC131212.3-201ENST00000624087 4219 ntBASIC14.23□□□□□ -0.13
VCLP18206 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.23□□□□□ -0.13
VCLP18206 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VCLP18206 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 PCDHB18P-202ENST00000526308 3197 ntBASIC14.22□□□□□ -0.13
VCLP18206 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 AC111170.3-201ENST00000624282 2464 ntBASIC14.22□□□□□ -0.13
VCLP18206 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms