Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.14□□□□□ -0.31
PRKCAP17252 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PRKCAP17252 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.14□□□□□ -0.31
PRKCAP17252 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
PRKCAP17252 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PRKCAP17252 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PRKCAP17252 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRKCAP17252 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRKCAP17252 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRKCAP17252 TUBB8P4-201ENST00000511806 1324 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.13□□□□□ -0.31
PRKCAP17252 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 KRT8P24-201ENST00000560290 1559 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 LAP3P2-201ENST00000454686 1454 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 DPM3-202ENST00000368399 517 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.13□□□□□ -0.31
PRKCAP17252 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.13□□□□□ -0.31
PRKCAP17252 AC244107.1-201ENST00000442033 332 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.13□□□□□ -0.31
PRKCAP17252 AC106794.1-201ENST00000506935 792 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PRKCAP17252 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.13□□□□□ -0.31
PRKCAP17252 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.13□□□□□ -0.31
PRKCAP17252 AC090164.2-201ENST00000611487 516 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.13□□□□□ -0.31
PRKCAP17252 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 AL022313.4-201ENST00000562756 2046 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PRKCAP17252 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 AHCYP4-201ENST00000419201 1315 ntBASIC13.13□□□□□ -0.31
PRKCAP17252 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.13□□□□□ -0.31
PRKCAP17252 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRKCAP17252 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PRKCAP17252 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PRKCAP17252 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
PRKCAP17252 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
PRKCAP17252 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 FAM86MP-201ENST00000340703 885 ntBASIC13.12□□□□□ -0.31
PRKCAP17252 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PRKCAP17252 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.12□□□□□ -0.31
PRKCAP17252 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.12□□□□□ -0.31
PRKCAP17252 AC004898.1-201ENST00000451057 766 ntBASIC13.12□□□□□ -0.31
PRKCAP17252 AC104073.2-201ENST00000453737 312 ntBASIC13.12□□□□□ -0.31
PRKCAP17252 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.12□□□□□ -0.31
PRKCAP17252 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.12□□□□□ -0.31
PRKCAP17252 PGAM1P5-201ENST00000548011 764 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms