Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.16□□□□□ -0.46
ACAA1P09110 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ACAA1P09110 CCT8L1P-201ENST00000465400 1674 ntBASIC12.16□□□□□ -0.46
ACAA1P09110 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACAA1P09110 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ACAA1P09110 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.16□□□□□ -0.46
ACAA1P09110 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ACAA1P09110 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.16□□□□□ -0.46
ACAA1P09110 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.15□□□□□ -0.46
ACAA1P09110 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.15□□□□□ -0.46
ACAA1P09110 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.15□□□□□ -0.46
ACAA1P09110 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.15□□□□□ -0.46
ACAA1P09110 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.15□□□□□ -0.46
ACAA1P09110 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.15□□□□□ -0.46
ACAA1P09110 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.15□□□□□ -0.46
ACAA1P09110 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.15□□□□□ -0.46
ACAA1P09110 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.15□□□□□ -0.46
ACAA1P09110 PFN1P12-201ENST00000455938 534 ntBASIC12.15□□□□□ -0.46
ACAA1P09110 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.15□□□□□ -0.46
ACAA1P09110 HLA-J-204ENST00000495278 958 ntBASIC12.15□□□□□ -0.46
ACAA1P09110 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.15□□□□□ -0.46
ACAA1P09110 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.15□□□□□ -0.46
ACAA1P09110 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.15□□□□□ -0.46
ACAA1P09110 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.15□□□□□ -0.46
ACAA1P09110 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.15□□□□□ -0.46
ACAA1P09110 BNIP3P13-201ENST00000599968 566 ntBASIC12.15□□□□□ -0.46
ACAA1P09110 AC007663.3-201ENST00000609632 465 ntBASIC12.15□□□□□ -0.46
ACAA1P09110 AC005695.3-201ENST00000614522 232 ntBASIC12.15□□□□□ -0.46
ACAA1P09110 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ACAA1P09110 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ACAA1P09110 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
ACAA1P09110 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ACAA1P09110 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.15□□□□□ -0.47
ACAA1P09110 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.15□□□□□ -0.47
ACAA1P09110 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
ACAA1P09110 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ACAA1P09110 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
ACAA1P09110 CICP1-201ENST00000416803 2410 ntBASIC12.15□□□□□ -0.47
ACAA1P09110 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
ACAA1P09110 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
ACAA1P09110 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ACAA1P09110 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ACAA1P09110 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ACAA1P09110 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms