Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.59□□□□□ -0.39
APOA1P02647 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.59□□□□□ -0.39
APOA1P02647 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 AL596442.2-201ENST00000610240 980 ntBASIC12.59□□□□□ -0.39
APOA1P02647 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.59□□□□□ -0.39
APOA1P02647 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.59□□□□□ -0.39
APOA1P02647 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
APOA1P02647 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOA1P02647 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
APOA1P02647 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
APOA1P02647 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.58□□□□□ -0.4
APOA1P02647 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
APOA1P02647 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.58□□□□□ -0.4
APOA1P02647 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.58□□□□□ -0.4
APOA1P02647 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.58□□□□□ -0.4
APOA1P02647 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 AC009078.2-202ENST00000463353 338 ntBASIC12.58□□□□□ -0.4
APOA1P02647 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
APOA1P02647 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.58□□□□□ -0.4
APOA1P02647 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.58□□□□□ -0.4
APOA1P02647 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.58□□□□□ -0.4
APOA1P02647 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
APOA1P02647 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
APOA1P02647 AC092139.4-201ENST00000624318 2794 ntBASIC12.58□□□□□ -0.4
APOA1P02647 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOA1P02647 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOA1P02647 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOA1P02647 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOA1P02647 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
APOA1P02647 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.57□□□□□ -0.4
APOA1P02647 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOA1P02647 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOA1P02647 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
APOA1P02647 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
APOA1P02647 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOA1P02647 AC099521.2-201ENST00000619354 2036 ntBASIC12.57□□□□□ -0.4
APOA1P02647 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOA1P02647 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms