Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CFAP99D6REC4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CFAP99D6REC4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.18□□□□□ -0.14
CFAP99D6REC4 AC007952.5-201ENST00000572818 1486 ntBASIC14.18□□□□□ -0.14
CFAP99D6REC4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CFAP99D6REC4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.18□□□□□ -0.14
CFAP99D6REC4 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CFAP99D6REC4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CFAP99D6REC4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CFAP99D6REC4 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CFAP99D6REC4 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 MST1P2-201ENST00000457982 2291 ntBASIC14.17□□□□□ -0.14
CFAP99D6REC4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 AC090643.2-201ENST00000623442 2029 ntBASIC14.17□□□□□ -0.14
CFAP99D6REC4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 BX284668.4-201ENST00000453917 508 ntBASIC14.17□□□□□ -0.14
CFAP99D6REC4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 AC105206.1-202ENST00000314927 2368 ntBASIC14.17□□□□□ -0.14
CFAP99D6REC4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 PCDHA5-203ENST00000614258 4248 ntBASIC14.17□□□□□ -0.14
CFAP99D6REC4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP99D6REC4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP99D6REC4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 AC239868.1-201ENST00000369385 493 ntBASIC14.16□□□□□ -0.14
CFAP99D6REC4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP99D6REC4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CFAP99D6REC4 MIR769-201ENST00000390225 118 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms