Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
HDAC5Q9UQL6 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.52■□□□□ 0.4
HDAC5Q9UQL6 AC079328.1-201ENST00000560358 952 ntBASIC17.52■□□□□ 0.4
HDAC5Q9UQL6 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.52■□□□□ 0.4
HDAC5Q9UQL6 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC17.52■□□□□ 0.4
HDAC5Q9UQL6 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC5Q9UQL6 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.52■□□□□ 0.39
HDAC5Q9UQL6 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC5Q9UQL6 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC5Q9UQL6 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC5Q9UQL6 AC093462.1-201ENST00000621167 1683 ntBASIC17.52■□□□□ 0.39
HDAC5Q9UQL6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 AL512430.1-201ENST00000392575 860 ntBASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 HERC2P11-201ENST00000562845 725 ntBASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 AC100756.2-201ENST00000569537 736 ntBASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 AP000322.3-201ENST00000608665 388 ntBASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC5Q9UQL6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 AC092573.1-201ENST00000433054 884 ntBASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 MRPL22P1-201ENST00000505398 616 ntBASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 AC138894.2-201ENST00000602838 371 ntBASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 FMO6P-201ENST00000236166 1620 ntBASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 RET-205ENST00000615310 4337 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC5Q9UQL6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 PDXDC2P-206ENST00000534700 1315 ntBASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC5Q9UQL6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms