Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 AC092115.1-201ENST00000566277 1402 ntBASIC15.69■□□□□ 0.1
COL20A1Q9P218 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.69■□□□□ 0.1
COL20A1Q9P218 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 AC011247.3-201ENST00000603297 438 ntBASIC15.69■□□□□ 0.1
COL20A1Q9P218 AC006483.2-201ENST00000609813 515 ntBASIC15.69■□□□□ 0.1
COL20A1Q9P218 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL20A1Q9P218 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COL20A1Q9P218 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 AC245140.2-201ENST00000624054 1939 ntBASIC15.68■□□□□ 0.1
COL20A1Q9P218 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 PSMD4P1-201ENST00000433951 1109 ntBASIC15.68■□□□□ 0.1
COL20A1Q9P218 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 BPIFB5P-201ENST00000457066 1099 ntBASIC15.68■□□□□ 0.1
COL20A1Q9P218 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 AC055811.3-201ENST00000584952 686 ntBASIC15.68■□□□□ 0.1
COL20A1Q9P218 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 AC138466.4-201ENST00000623965 852 ntBASIC15.68■□□□□ 0.1
COL20A1Q9P218 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.68■□□□□ 0.1
COL20A1Q9P218 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL20A1Q9P218 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms