Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 AC027612.1-201ENST00000445234 2395 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HACD3Q9P035 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 AC023794.5-201ENST00000564380 2157 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 AC239868.1-201ENST00000369385 493 ntBASIC14.31□□□□□ -0.12
HACD3Q9P035 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HACD3Q9P035 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HACD3Q9P035 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 AKR7A2P1-201ENST00000460134 915 ntBASIC14.31□□□□□ -0.12
HACD3Q9P035 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.31□□□□□ -0.12
HACD3Q9P035 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.31□□□□□ -0.12
HACD3Q9P035 MIR6799-201ENST00000620297 69 ntBASIC14.31□□□□□ -0.12
HACD3Q9P035 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.31□□□□□ -0.12
HACD3Q9P035 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.31□□□□□ -0.12
HACD3Q9P035 LINC00115-201ENST00000473798 1317 ntBASIC14.31□□□□□ -0.12
HACD3Q9P035 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 AC073957.3-201ENST00000609998 6758 ntBASIC14.31□□□□□ -0.12
HACD3Q9P035 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 AC020907.1-201ENST00000616460 1350 ntBASIC14.31□□□□□ -0.12
HACD3Q9P035 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
HACD3Q9P035 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HACD3Q9P035 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.31□□□□□ -0.12
HACD3Q9P035 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.3□□□□□ -0.12
HACD3Q9P035 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.3□□□□□ -0.12
HACD3Q9P035 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
HACD3Q9P035 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.3□□□□□ -0.12
HACD3Q9P035 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.3□□□□□ -0.12
HACD3Q9P035 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.3□□□□□ -0.12
HACD3Q9P035 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.3□□□□□ -0.12
HACD3Q9P035 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.3□□□□□ -0.12
HACD3Q9P035 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HACD3Q9P035 RNA5SP359-201ENST00000364838 113 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms