Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 CCT8L1P-201ENST00000465400 1674 ntBASIC17.36■□□□□ 0.37
UPF2Q9HAU5 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 GHET1-201ENST00000627071 1906 ntBASIC17.35■□□□□ 0.37
UPF2Q9HAU5 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 CR383656.2-201ENST00000548656 2254 ntBASIC17.35■□□□□ 0.37
UPF2Q9HAU5 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 AL136309.1-201ENST00000403917 691 ntBASIC17.35■□□□□ 0.37
UPF2Q9HAU5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 AL355864.2-201ENST00000447420 863 ntBASIC17.35■□□□□ 0.37
UPF2Q9HAU5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 SERBP1P5-201ENST00000510079 1181 ntBASIC17.35■□□□□ 0.37
UPF2Q9HAU5 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF2Q9HAU5 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 C2orf27AP3-201ENST00000434123 579 ntBASIC17.34■□□□□ 0.37
UPF2Q9HAU5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 AC025279.2-201ENST00000569730 653 ntBASIC17.34■□□□□ 0.37
UPF2Q9HAU5 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 AL358472.3-201ENST00000608147 415 ntBASIC17.34■□□□□ 0.37
UPF2Q9HAU5 PPP1R26P2-201ENST00000611403 3595 ntBASIC17.34■□□□□ 0.37
UPF2Q9HAU5 AL354718.3-201ENST00000616414 581 ntBASIC17.34■□□□□ 0.37
UPF2Q9HAU5 CR382287.1-201ENST00000623954 586 ntBASIC17.34■□□□□ 0.37
UPF2Q9HAU5 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 TMBIM7P-202ENST00000641474 1516 ntBASIC17.34■□□□□ 0.37
UPF2Q9HAU5 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF2Q9HAU5 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.33■□□□□ 0.37
UPF2Q9HAU5 CIC-204ENST00000572681 8218 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms