Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 KRT8P30-201ENST00000432100 650 ntBASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AC092612.1-201ENST00000514501 998 ntBASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AC005740.1-201ENST00000515639 522 ntBASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AC006483.2-201ENST00000609813 515 ntBASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AC006987.1-201ENST00000413610 527 ntBASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 BRI3P1-201ENST00000440440 378 ntBASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 RN7SL277P-201ENST00000481521 288 ntBASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AC008026.2-201ENST00000495438 348 ntBASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 CES1P2-201ENST00000566467 1242 ntBASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RP1L1Q8IWN7 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RP1L1Q8IWN7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms