Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 GOLGA2P4-201ENST00000441462 777 ntBASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 RNA5SP412-201ENST00000516234 123 ntBASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 BNIP3P13-201ENST00000599968 566 ntBASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 AC007663.3-201ENST00000609632 465 ntBASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 FP325330.2-201ENST00000624219 5630 ntBASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00346Q8IVM7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00346Q8IVM7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms