Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 RNA5SP491-201ENST00000362936 118 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 BCRP4-201ENST00000506079 804 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 AC004801.1-201ENST00000549557 360 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 RN7SL121P-201ENST00000584223 273 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 AC148477.9-201ENST00000623974 539 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 HSPA7-201ENST00000445535 1927 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 GUCY2EP-203ENST00000531117 1918 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 ENPP7P8-202ENST00000527856 1345 ntBASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 LINC02486-201ENST00000604157 3000 ntBASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 ZNF877P-201ENST00000437614 612 ntBASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 VDAC1P11-201ENST00000458323 852 ntBASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AC018846.1-201ENST00000568231 183 ntBASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 DGAT2L7P-201ENST00000602462 744 ntBASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AC020931.1-201ENST00000589622 1346 ntBASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS4Q8IUM7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
NPAS4Q8IUM7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms