Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 AP000346.4-201ENST00000614827 381 ntBASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ZNF880Q6PDB4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 AL365181.3-201ENST00000605886 3222 ntBASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 RPL13AP3-202ENST00000494676 1473 ntBASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 XBP1P1-201ENST00000436573 652 ntBASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.84□□□□□ -0.51
ZNF880Q6PDB4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms