Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.71□□□□□ -0.37
CDK5Q00535 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.71□□□□□ -0.37
CDK5Q00535 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 AC100827.2-201ENST00000563214 1194 ntBASIC12.71□□□□□ -0.37
CDK5Q00535 MIR4745-201ENST00000577608 62 ntBASIC12.71□□□□□ -0.37
CDK5Q00535 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.71□□□□□ -0.37
CDK5Q00535 AL162426.1-201ENST00000624141 743 ntBASIC12.71□□□□□ -0.37
CDK5Q00535 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 RHOXF1P1-202ENST00000635473 501 ntBASIC12.71□□□□□ -0.37
CDK5Q00535 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CDK5Q00535 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.71□□□□□ -0.38
CDK5Q00535 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CDK5Q00535 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.71□□□□□ -0.38
CDK5Q00535 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.71□□□□□ -0.38
CDK5Q00535 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CDK5Q00535 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDK5Q00535 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDK5Q00535 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.71□□□□□ -0.38
CDK5Q00535 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CDK5Q00535 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDK5Q00535 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CDK5Q00535 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDK5Q00535 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
CDK5Q00535 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.71□□□□□ -0.38
CDK5Q00535 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.7□□□□□ -0.38
CDK5Q00535 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.7□□□□□ -0.38
CDK5Q00535 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 AC022364.1-202ENST00000617468 2409 ntBASIC12.7□□□□□ -0.38
CDK5Q00535 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.7□□□□□ -0.38
CDK5Q00535 TMEM14DP-201ENST00000422205 345 ntBASIC12.7□□□□□ -0.38
CDK5Q00535 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 XBP1P1-201ENST00000436573 652 ntBASIC12.7□□□□□ -0.38
CDK5Q00535 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.7□□□□□ -0.38
CDK5Q00535 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CDK5Q00535 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.7□□□□□ -0.38
CDK5Q00535 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.7□□□□□ -0.38
CDK5Q00535 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.7□□□□□ -0.38
CDK5Q00535 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.7□□□□□ -0.38
CDK5Q00535 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.7□□□□□ -0.38
CDK5Q00535 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
CDK5Q00535 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.7□□□□□ -0.38
CDK5Q00535 AC107375.1-201ENST00000564464 2231 ntBASIC12.7□□□□□ -0.38
CDK5Q00535 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
CDK5Q00535 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CDK5Q00535 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CDK5Q00535 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.7□□□□□ -0.38
CDK5Q00535 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDK5Q00535 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CDK5Q00535 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.69□□□□□ -0.38
CDK5Q00535 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CDK5Q00535 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CDK5Q00535 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CDK5Q00535 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.69□□□□□ -0.38
CDK5Q00535 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDK5Q00535 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms