Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.66□□□□□ -0.54
SRPXP78539 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.66□□□□□ -0.54
SRPXP78539 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SRPXP78539 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
SRPXP78539 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SRPXP78539 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SRPXP78539 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.66□□□□□ -0.54
SRPXP78539 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.66□□□□□ -0.54
SRPXP78539 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRPXP78539 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.66□□□□□ -0.54
SRPXP78539 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC11.65□□□□□ -0.54
SRPXP78539 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
SRPXP78539 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
SRPXP78539 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
SRPXP78539 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 ZNF493-208ENST00000599461 1769 ntBASIC11.65□□□□□ -0.54
SRPXP78539 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
SRPXP78539 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.65□□□□□ -0.54
SRPXP78539 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.65□□□□□ -0.54
SRPXP78539 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
SRPXP78539 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.65□□□□□ -0.54
SRPXP78539 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.65□□□□□ -0.54
SRPXP78539 AC093028.1-201ENST00000622998 982 ntBASIC11.65□□□□□ -0.54
SRPXP78539 AC090386.2-201ENST00000623010 1039 ntBASIC11.65□□□□□ -0.54
SRPXP78539 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.65□□□□□ -0.54
SRPXP78539 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.65□□□□□ -0.54
SRPXP78539 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SRPXP78539 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
SRPXP78539 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.65□□□□□ -0.54
SRPXP78539 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRPXP78539 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.65□□□□□ -0.54
SRPXP78539 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
SRPXP78539 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
SRPXP78539 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
SRPXP78539 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SRPXP78539 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SRPXP78539 CICP1-201ENST00000416803 2410 ntBASIC11.65□□□□□ -0.55
SRPXP78539 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.65□□□□□ -0.55
SRPXP78539 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
SRPXP78539 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.65□□□□□ -0.55
SRPXP78539 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SRPXP78539 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SRPXP78539 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SRPXP78539 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SRPXP78539 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms