Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.84■□□□□ 0.13
CCNA1P78396 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.84■□□□□ 0.13
CCNA1P78396 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.84■□□□□ 0.13
CCNA1P78396 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.84■□□□□ 0.13
CCNA1P78396 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 ENPP7P8-202ENST00000527856 1345 ntBASIC15.84■□□□□ 0.13
CCNA1P78396 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CCNA1P78396 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.84■□□□□ 0.13
CCNA1P78396 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.84■□□□□ 0.13
CCNA1P78396 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 OR2I1P-210ENST00000642037 4691 ntBASIC15.83■□□□□ 0.13
CCNA1P78396 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CCNA1P78396 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CCNA1P78396 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.83■□□□□ 0.13
CCNA1P78396 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.83■□□□□ 0.13
CCNA1P78396 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCNA1P78396 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.83■□□□□ 0.13
CCNA1P78396 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
CCNA1P78396 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.83■□□□□ 0.12
CCNA1P78396 PGAM1P11-201ENST00000416729 680 ntBASIC15.83■□□□□ 0.12
CCNA1P78396 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.83■□□□□ 0.12
CCNA1P78396 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.83■□□□□ 0.12
CCNA1P78396 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CCNA1P78396 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.83■□□□□ 0.12
CCNA1P78396 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.83■□□□□ 0.12
CCNA1P78396 AC018846.1-201ENST00000568231 183 ntBASIC15.83■□□□□ 0.12
CCNA1P78396 RN7SL121P-201ENST00000584223 273 ntBASIC15.83■□□□□ 0.12
CCNA1P78396 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC15.83■□□□□ 0.12
CCNA1P78396 GGNBP1-204ENST00000613113 887 ntBASIC15.83■□□□□ 0.12
CCNA1P78396 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.83■□□□□ 0.12
CCNA1P78396 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.83■□□□□ 0.12
CCNA1P78396 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.83■□□□□ 0.12
CCNA1P78396 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CCNA1P78396 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CCNA1P78396 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CCNA1P78396 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.83■□□□□ 0.12
CCNA1P78396 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNA1P78396 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCNA1P78396 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNA1P78396 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNA1P78396 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCNA1P78396 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 AC007279.1-201ENST00000448547 837 ntBASIC15.82■□□□□ 0.12
CCNA1P78396 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNA1P78396 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CCNA1P78396 BCRP4-201ENST00000506079 804 ntBASIC15.82■□□□□ 0.12
CCNA1P78396 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC15.82■□□□□ 0.12
CCNA1P78396 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.82■□□□□ 0.12
CCNA1P78396 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC15.82■□□□□ 0.12
CCNA1P78396 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.82■□□□□ 0.12
CCNA1P78396 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNA1P78396 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 RCC2P1-201ENST00000452257 1476 ntBASIC15.82■□□□□ 0.12
CCNA1P78396 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNA1P78396 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.82■□□□□ 0.12
CCNA1P78396 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNA1P78396 Z98885.3-201ENST00000624882 1757 ntBASIC15.82■□□□□ 0.12
CCNA1P78396 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms