Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 REXO1L6P-201ENST00000603433 1515 ntBASIC12.85□□□□□ -0.35
CXCR4P61073 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CXCR4P61073 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CXCR4P61073 CYMP-203ENST00000474680 1263 ntBASIC12.85□□□□□ -0.35
CXCR4P61073 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.85□□□□□ -0.35
CXCR4P61073 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 TDH-203ENST00000531764 1110 ntBASIC12.85□□□□□ -0.35
CXCR4P61073 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CXCR4P61073 AJ011932.1-201ENST00000621707 465 ntBASIC12.85□□□□□ -0.35
CXCR4P61073 AC027601.3-201ENST00000622907 509 ntBASIC12.85□□□□□ -0.35
CXCR4P61073 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 AL031432.4-201ENST00000641729 2190 ntBASIC12.85□□□□□ -0.35
CXCR4P61073 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CXCR4P61073 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CXCR4P61073 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCR4P61073 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCR4P61073 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CXCR4P61073 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.84□□□□□ -0.35
CXCR4P61073 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.84□□□□□ -0.35
CXCR4P61073 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CXCR4P61073 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.84□□□□□ -0.35
CXCR4P61073 ACTG1P3-201ENST00000431775 1114 ntBASIC12.84□□□□□ -0.35
CXCR4P61073 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 FAM207CP-201ENST00000443486 507 ntBASIC12.84□□□□□ -0.35
CXCR4P61073 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.84□□□□□ -0.35
CXCR4P61073 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.84□□□□□ -0.35
CXCR4P61073 CICP12-201ENST00000455801 843 ntBASIC12.84□□□□□ -0.35
CXCR4P61073 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CXCR4P61073 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.84□□□□□ -0.35
CXCR4P61073 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.84□□□□□ -0.35
CXCR4P61073 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.84□□□□□ -0.35
CXCR4P61073 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.84□□□□□ -0.35
CXCR4P61073 LINC02560-201ENST00000596379 459 ntBASIC12.84□□□□□ -0.35
CXCR4P61073 ECM1P1-201ENST00000604092 1279 ntBASIC12.84□□□□□ -0.35
CXCR4P61073 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.84□□□□□ -0.35
CXCR4P61073 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms