Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC10.33□□□□□ -0.76
APOC4P55056 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC10.33□□□□□ -0.76
APOC4P55056 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC10.33□□□□□ -0.76
APOC4P55056 HINT1-205ENST00000508488 703 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC10.33□□□□□ -0.76
APOC4P55056 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC10.33□□□□□ -0.76
APOC4P55056 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 DNM1P30-201ENST00000563586 452 ntBASIC10.33□□□□□ -0.76
APOC4P55056 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC10.33□□□□□ -0.76
APOC4P55056 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
APOC4P55056 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.33□□□□□ -0.76
APOC4P55056 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
APOC4P55056 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
APOC4P55056 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOC4P55056 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 LINC02228-204ENST00000642115 2962 ntBASIC10.32□□□□□ -0.76
APOC4P55056 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.32□□□□□ -0.76
APOC4P55056 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.32□□□□□ -0.76
APOC4P55056 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
APOC4P55056 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
APOC4P55056 RPSAP31-201ENST00000416648 895 ntBASIC10.32□□□□□ -0.76
APOC4P55056 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC10.32□□□□□ -0.76
APOC4P55056 CSNK1G2P1-201ENST00000442675 955 ntBASIC10.32□□□□□ -0.76
APOC4P55056 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC10.32□□□□□ -0.76
APOC4P55056 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms