Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC20.34■□□□□ 0.85
KDM5CP41229 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
KDM5CP41229 AC021321.1-201ENST00000607397 1113 ntBASIC20.34■□□□□ 0.85
KDM5CP41229 AL109954.3-201ENST00000615088 558 ntBASIC20.34■□□□□ 0.85
KDM5CP41229 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM5CP41229 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KDM5CP41229 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
KDM5CP41229 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KDM5CP41229 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 AL031587.5-201ENST00000624344 1849 ntBASIC20.33■□□□□ 0.85
KDM5CP41229 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC20.33■□□□□ 0.85
KDM5CP41229 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC20.33■□□□□ 0.85
KDM5CP41229 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM5CP41229 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC20.33■□□□□ 0.84
KDM5CP41229 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 U3.41-201ENST00000408711 219 ntBASIC20.33■□□□□ 0.84
KDM5CP41229 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC20.33■□□□□ 0.84
KDM5CP41229 CCNL2P1-201ENST00000512846 969 ntBASIC20.33■□□□□ 0.84
KDM5CP41229 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC20.33■□□□□ 0.84
KDM5CP41229 AC063977.2-201ENST00000601996 421 ntBASIC20.33■□□□□ 0.84
KDM5CP41229 BX510359.7-201ENST00000619819 630 ntBASIC20.33■□□□□ 0.84
KDM5CP41229 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC20.33■□□□□ 0.84
KDM5CP41229 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC20.33■□□□□ 0.84
KDM5CP41229 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM5CP41229 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC20.32■□□□□ 0.84
KDM5CP41229 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KDM5CP41229 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
KDM5CP41229 ASLP1-201ENST00000428790 637 ntBASIC20.32■□□□□ 0.84
KDM5CP41229 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC20.32■□□□□ 0.84
KDM5CP41229 AC104117.4-201ENST00000521486 847 ntBASIC20.32■□□□□ 0.84
KDM5CP41229 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC20.32■□□□□ 0.84
KDM5CP41229 NAT9-204ENST00000578822 839 ntTSL 3 BASIC20.32■□□□□ 0.84
KDM5CP41229 AC211476.2-201ENST00000608799 708 ntBASIC20.32■□□□□ 0.84
KDM5CP41229 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KDM5CP41229 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM5CP41229 ATF4P4-201ENST00000393544 1930 ntBASIC20.32■□□□□ 0.84
KDM5CP41229 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
KDM5CP41229 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC20.31■□□□□ 0.84
KDM5CP41229 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDM5CP41229 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM5CP41229 MKRN7P-201ENST00000433469 1371 ntBASIC20.31■□□□□ 0.84
KDM5CP41229 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KDM5CP41229 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KDM5CP41229 NOS2P3-201ENST00000411468 867 ntBASIC20.31■□□□□ 0.84
KDM5CP41229 AC026884.1-201ENST00000418296 457 ntBASIC20.31■□□□□ 0.84
KDM5CP41229 NOS2P2-201ENST00000426269 867 ntBASIC20.31■□□□□ 0.84
KDM5CP41229 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC20.31■□□□□ 0.84
KDM5CP41229 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC20.31■□□□□ 0.84
KDM5CP41229 AC092535.4-201ENST00000609548 397 ntBASIC20.31■□□□□ 0.84
KDM5CP41229 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM5CP41229 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
KDM5CP41229 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM5CP41229 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
KDM5CP41229 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDM5CP41229 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM5CP41229 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KDM5CP41229 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC20.3■□□□□ 0.84
KDM5CP41229 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KDM5CP41229 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 SNORD23-201ENST00000408876 110 ntBASIC20.3■□□□□ 0.84
KDM5CP41229 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC20.3■□□□□ 0.84
KDM5CP41229 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC20.3■□□□□ 0.84
KDM5CP41229 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC20.3■□□□□ 0.84
KDM5CP41229 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KDM5CP41229 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms