Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC18.48■□□□□ 0.55
USP6P35125 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC18.48■□□□□ 0.55
USP6P35125 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC18.48■□□□□ 0.55
USP6P35125 HLA-W-207ENST00000439514 771 ntBASIC18.48■□□□□ 0.55
USP6P35125 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC18.48■□□□□ 0.55
USP6P35125 AC099328.1-201ENST00000498809 1030 ntBASIC18.48■□□□□ 0.55
USP6P35125 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
USP6P35125 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC18.48■□□□□ 0.55
USP6P35125 KRT18P8-201ENST00000581937 1246 ntBASIC18.48■□□□□ 0.55
USP6P35125 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
USP6P35125 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
USP6P35125 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
USP6P35125 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
USP6P35125 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
USP6P35125 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
USP6P35125 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.47■□□□□ 0.55
USP6P35125 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
USP6P35125 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
USP6P35125 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.47■□□□□ 0.55
USP6P35125 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
USP6P35125 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
USP6P35125 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
USP6P35125 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC18.47■□□□□ 0.55
USP6P35125 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC18.47■□□□□ 0.55
USP6P35125 IGHEP1-201ENST00000521393 651 ntBASIC18.47■□□□□ 0.55
USP6P35125 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP6P35125 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
USP6P35125 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.46■□□□□ 0.55
USP6P35125 AC015656.1-201ENST00000624209 3578 ntBASIC18.46■□□□□ 0.55
USP6P35125 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP6P35125 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC18.46■□□□□ 0.55
USP6P35125 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC18.46■□□□□ 0.55
USP6P35125 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP6P35125 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP6P35125 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
USP6P35125 SNORA50D-201ENST00000408059 134 ntBASIC18.46■□□□□ 0.55
USP6P35125 RPL35P1-201ENST00000450819 370 ntBASIC18.46■□□□□ 0.55
USP6P35125 AP000533.1-201ENST00000456143 1177 ntBASIC18.46■□□□□ 0.55
USP6P35125 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC18.46■□□□□ 0.55
USP6P35125 ALG1L15P-201ENST00000482834 794 ntBASIC18.46■□□□□ 0.55
USP6P35125 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
USP6P35125 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC18.46■□□□□ 0.55
USP6P35125 AC004686.1-201ENST00000605113 538 ntBASIC18.46■□□□□ 0.55
USP6P35125 AC080013.5-201ENST00000607044 679 ntBASIC18.46■□□□□ 0.55
USP6P35125 AP000553.2-201ENST00000609038 441 ntBASIC18.46■□□□□ 0.55
USP6P35125 AC020922.4-201ENST00000621389 339 ntBASIC18.46■□□□□ 0.55
USP6P35125 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC18.46■□□□□ 0.55
USP6P35125 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP6P35125 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.46■□□□□ 0.55
USP6P35125 NME1-209ENST00000511355 1645 ntTSL 5 BASIC18.46■□□□□ 0.55
USP6P35125 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP6P35125 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP6P35125 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC18.46■□□□□ 0.54
USP6P35125 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC18.45■□□□□ 0.54
USP6P35125 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP6P35125 RN7SL578P-201ENST00000477781 283 ntBASIC18.45■□□□□ 0.54
USP6P35125 AK2-208ENST00000487289 920 ntTSL 2 BASIC18.45■□□□□ 0.54
USP6P35125 GPX3-202ENST00000517973 612 ntTSL 3 BASIC18.45■□□□□ 0.54
USP6P35125 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 AC009041.4-201ENST00000620075 638 ntBASIC18.45■□□□□ 0.54
USP6P35125 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC18.45■□□□□ 0.54
USP6P35125 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
USP6P35125 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
USP6P35125 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.45■□□□□ 0.54
USP6P35125 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP6P35125 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.45■□□□□ 0.54
USP6P35125 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.45■□□□□ 0.54
USP6P35125 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6P35125 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6P35125 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6P35125 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6P35125 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6P35125 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
USP6P35125 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6P35125 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms