Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RETP07949 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.19□□□□□ -0.14
RETP07949 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.19□□□□□ -0.14
RETP07949 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.19□□□□□ -0.14
RETP07949 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 RNVU1-8-201ENST00000364272 125 ntBASIC14.19□□□□□ -0.14
RETP07949 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RETP07949 AP000354.1-201ENST00000396982 456 ntBASIC14.19□□□□□ -0.14
RETP07949 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RETP07949 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.19□□□□□ -0.14
RETP07949 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.19□□□□□ -0.14
RETP07949 AC004522.1-201ENST00000419978 654 ntBASIC14.19□□□□□ -0.14
RETP07949 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.19□□□□□ -0.14
RETP07949 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.19□□□□□ -0.14
RETP07949 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.19□□□□□ -0.14
RETP07949 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.19□□□□□ -0.14
RETP07949 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.19□□□□□ -0.14
RETP07949 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.19□□□□□ -0.14
RETP07949 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 TRMT112P3-201ENST00000580149 358 ntBASIC14.19□□□□□ -0.14
RETP07949 AL160191.2-201ENST00000603975 601 ntBASIC14.19□□□□□ -0.14
RETP07949 AC004686.1-201ENST00000605113 538 ntBASIC14.19□□□□□ -0.14
RETP07949 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.19□□□□□ -0.14
RETP07949 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.19□□□□□ -0.14
RETP07949 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.19□□□□□ -0.14
RETP07949 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.19□□□□□ -0.14
RETP07949 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.19□□□□□ -0.14
RETP07949 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
RETP07949 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RETP07949 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RETP07949 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RETP07949 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RETP07949 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RETP07949 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.18□□□□□ -0.14
RETP07949 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RETP07949 AC016397.2-201ENST00000624848 1985 ntBASIC14.18□□□□□ -0.14
RETP07949 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.18□□□□□ -0.14
RETP07949 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RETP07949 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.18□□□□□ -0.14
RETP07949 OR8T1P-201ENST00000421347 918 ntBASIC14.18□□□□□ -0.14
RETP07949 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.18□□□□□ -0.14
RETP07949 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RETP07949 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.18□□□□□ -0.14
RETP07949 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.18□□□□□ -0.14
RETP07949 AC013553.1-201ENST00000560906 267 ntBASIC14.18□□□□□ -0.14
RETP07949 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms