Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
IFNA1P01562 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 LINC00563-201ENST00000566370 1400 ntBASIC11.17□□□□□ -0.62
IFNA1P01562 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
IFNA1P01562 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
IFNA1P01562 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.16□□□□□ -0.62
IFNA1P01562 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
IFNA1P01562 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
IFNA1P01562 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
IFNA1P01562 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 AC020917.4-201ENST00000623994 1999 ntBASIC11.16□□□□□ -0.62
IFNA1P01562 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.16□□□□□ -0.62
IFNA1P01562 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 AC004870.1-201ENST00000315132 882 ntBASIC11.16□□□□□ -0.62
IFNA1P01562 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 AC114812.1-204ENST00000449669 728 ntBASIC11.16□□□□□ -0.62
IFNA1P01562 RPL13AP25-201ENST00000484130 612 ntBASIC11.16□□□□□ -0.62
IFNA1P01562 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.16□□□□□ -0.62
IFNA1P01562 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 AC051619.7-201ENST00000568314 623 ntBASIC11.16□□□□□ -0.62
IFNA1P01562 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 FAM197Y3-203ENST00000618346 717 ntBASIC11.16□□□□□ -0.62
IFNA1P01562 AL158212.4-201ENST00000624062 1286 ntBASIC11.16□□□□□ -0.62
IFNA1P01562 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
IFNA1P01562 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
IFNA1P01562 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 DNM1P41-201ENST00000623634 3350 ntBASIC11.16□□□□□ -0.62
IFNA1P01562 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.16□□□□□ -0.62
IFNA1P01562 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.16□□□□□ -0.62
IFNA1P01562 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
IFNA1P01562 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
IFNA1P01562 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11.15□□□□□ -0.62
IFNA1P01562 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
IFNA1P01562 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.15□□□□□ -0.62
IFNA1P01562 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC11.15□□□□□ -0.62
IFNA1P01562 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
IFNA1P01562 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
IFNA1P01562 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.15□□□□□ -0.62
IFNA1P01562 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms