Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI2Q9Y5P3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 AC023794.5-201ENST00000564380 2157 ntBASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 MIR645-201ENST00000385283 94 ntBASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 DUTP3-201ENST00000450025 415 ntBASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 RN7SL67P-201ENST00000492147 296 ntBASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 NDUFB10P1-201ENST00000567319 521 ntBASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 AC006453.1-201ENST00000636037 1257 ntBASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 AL591122.2-201ENST00000624125 1853 ntBASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 MARK2P16-201ENST00000605714 1723 ntBASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI2Q9Y5P3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 AL583805.1-201ENST00000391389 531 ntBASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 RPL8P2-201ENST00000430538 502 ntBASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 AC078991.1-201ENST00000437297 610 ntBASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 AP000358.1-201ENST00000456260 156 ntBASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.25□□□□□ -0.13
RAI2Q9Y5P3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms