Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 PCDHB19P-202ENST00000625133 2914 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AC104758.3-203ENST00000562938 2123 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 SHMT1P1-201ENST00000419974 1312 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 MIR326-201ENST00000362220 95 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 C2orf27AP3-201ENST00000434123 579 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AL645933.1-201ENST00000440087 609 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AMT-221ENST00000538581 2038 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AC140912.1-201ENST00000577171 1054 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AC073413.1-201ENST00000603927 732 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AL136301.1-201ENST00000615830 422 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AL354718.3-201ENST00000616414 581 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AC090386.2-201ENST00000623010 1039 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 CR382287.1-201ENST00000623954 586 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 CICP1-201ENST00000416803 2410 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AL354989.2-201ENST00000435838 1540 ntBASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBE2D4Q9Y2X8 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBE2D4Q9Y2X8 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBE2D4Q9Y2X8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBE2D4Q9Y2X8 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBE2D4Q9Y2X8 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBE2D4Q9Y2X8 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC9.85□□□□□ -0.83
UBE2D4Q9Y2X8 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC9.85□□□□□ -0.83
UBE2D4Q9Y2X8 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms