Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 FLJ16779-201ENST00000612722 7638 ntBASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 DNM1P46-202ENST00000415963 882 ntBASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 IFNL3P1-201ENST00000595082 501 ntBASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 AP006248.1-201ENST00000610471 67 ntBASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZC3H4Q9UPT8 AC005840.4-201ENST00000541242 2494 ntBASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 MPV17-209ENST00000405983 859 ntTSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 HMGA1P2-201ENST00000430198 324 ntBASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 AC079250.1-201ENST00000456046 531 ntBASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 RN7SL794P-201ENST00000469816 280 ntBASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 ABCD1P3-201ENST00000562927 605 ntBASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.79■□□□□ 0.28
ZC3H4Q9UPT8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms