Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC022210.1-201ENST00000449856 793 ntBASIC12.54□□□□□ -0.4
DUX4Q9UBX2 IGHV3-71-201ENST00000523324 359 ntBASIC12.54□□□□□ -0.4
DUX4Q9UBX2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 AL109976.1-201ENST00000621919 5678 ntBASIC12.54□□□□□ -0.4
DUX4Q9UBX2 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.53□□□□□ -0.4
DUX4Q9UBX2 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 TPM3P8-201ENST00000330554 643 ntBASIC12.53□□□□□ -0.4
DUX4Q9UBX2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 CNN2P8-201ENST00000421872 913 ntBASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AC026954.1-201ENST00000429771 1293 ntBASIC12.53□□□□□ -0.4
DUX4Q9UBX2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AL391280.1-201ENST00000506969 1062 ntBASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AP003171.2-201ENST00000528208 925 ntBASIC12.53□□□□□ -0.4
DUX4Q9UBX2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 RN7SL48P-201ENST00000579283 293 ntBASIC12.53□□□□□ -0.4
DUX4Q9UBX2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.53□□□□□ -0.4
DUX4Q9UBX2 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUX4Q9UBX2 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUX4Q9UBX2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUX4Q9UBX2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.52□□□□□ -0.4
DUX4Q9UBX2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms