Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 FAM90A22P-201ENST00000400142 1395 ntBASIC12.67□□□□□ -0.38
CHD8Q9HCK8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 AC004884.1-201ENST00000393647 319 ntBASIC12.67□□□□□ -0.38
CHD8Q9HCK8 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 ST3GAL1P1-201ENST00000513810 1014 ntBASIC12.67□□□□□ -0.38
CHD8Q9HCK8 SLC25A5P6-201ENST00000515328 886 ntBASIC12.67□□□□□ -0.38
CHD8Q9HCK8 OR7E126P-201ENST00000526217 888 ntBASIC12.67□□□□□ -0.38
CHD8Q9HCK8 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AC136621.1-201ENST00000624017 2304 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 TSEN15P3-201ENST00000422363 367 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AQP7-207ENST00000447660 998 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 CXXC1P1-202ENST00000489409 1212 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AP001775.1-201ENST00000532608 586 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 RAB42P1-201ENST00000555078 316 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 MIR197-201ENST00000384976 75 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 RN7SL229P-201ENST00000495651 299 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AC245884.8-201ENST00000599382 880 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 AP005117.1-202ENST00000581724 1908 ntBASIC12.66□□□□□ -0.38
CHD8Q9HCK8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHD8Q9HCK8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 AC215219.1-201ENST00000400706 1817 ntBASIC12.65□□□□□ -0.38
CHD8Q9HCK8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms