Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 AC239868.1-201ENST00000369385 493 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 AC006033.1-201ENST00000440505 426 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 AL008721.1-201ENST00000609964 604 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 AC138649.2-201ENST00000615886 705 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 AC079336.7-201ENST00000623428 1078 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 AL161773.1-201ENST00000624845 863 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 AC100757.4-201ENST00000626934 759 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 NAP1L6-202ENST00000641404 1222 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 AC020917.4-201ENST00000623994 1999 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 TUBBP5-203ENST00000508529 1334 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 AC067931.2-201ENST00000623655 2003 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 AGAP12P-201ENST00000585227 2359 ntBASIC12.32□□□□□ -0.44
HIST1H3AP68431 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H3AP68431 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H3AP68431 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AL139424.3-202ENST00000641619 917 ntBASIC12.31□□□□□ -0.44
HIST1H3AP68431 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms