Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 NHSL2-202ENST00000510661 3082 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CKS1BP61024 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
CKS1BP61024 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 TNRC18P1-201ENST00000502875 3650 ntBASIC9.99□□□□□ -0.81
CKS1BP61024 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 HNRNPMP1-201ENST00000560685 1768 ntBASIC9.99□□□□□ -0.81
CKS1BP61024 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC9.99□□□□□ -0.81
CKS1BP61024 RPL13AP25-201ENST00000484130 612 ntBASIC9.99□□□□□ -0.81
CKS1BP61024 LY6E-204ENST00000519546 971 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC9.99□□□□□ -0.81
CKS1BP61024 AC036164.1-201ENST00000570544 333 ntBASIC9.99□□□□□ -0.81
CKS1BP61024 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 GPX4-206ENST00000588919 803 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC9.99□□□□□ -0.81
CKS1BP61024 AL121894.2-201ENST00000602977 491 ntBASIC9.99□□□□□ -0.81
CKS1BP61024 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC9.99□□□□□ -0.81
CKS1BP61024 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC9.99□□□□□ -0.81
CKS1BP61024 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC9.99□□□□□ -0.81
CKS1BP61024 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CKS1BP61024 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC9.98□□□□□ -0.81
CKS1BP61024 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC9.98□□□□□ -0.81
CKS1BP61024 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
CKS1BP61024 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CKS1BP61024 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms