Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC10.5□□□□□ -0.73
CMC4P56277 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 IGHV3OR16-16-201ENST00000563644 343 ntBASIC10.5□□□□□ -0.73
CMC4P56277 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC10.5□□□□□ -0.73
CMC4P56277 AC087392.5-201ENST00000612517 489 ntBASIC10.5□□□□□ -0.73
CMC4P56277 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.5□□□□□ -0.73
CMC4P56277 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CMC4P56277 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 AL009178.2-201ENST00000597278 2719 ntBASIC10.5□□□□□ -0.73
CMC4P56277 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.5□□□□□ -0.73
CMC4P56277 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC10.5□□□□□ -0.73
CMC4P56277 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC10.49□□□□□ -0.73
CMC4P56277 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
CMC4P56277 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.49□□□□□ -0.73
CMC4P56277 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC10.49□□□□□ -0.73
CMC4P56277 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 FTH1P22-201ENST00000456305 520 ntBASIC10.49□□□□□ -0.73
CMC4P56277 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC10.49□□□□□ -0.73
CMC4P56277 TMEM198B-204ENST00000484016 896 ntBASIC10.49□□□□□ -0.73
CMC4P56277 AC130709.1-201ENST00000484779 1212 ntBASIC10.49□□□□□ -0.73
CMC4P56277 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 RN7SL81P-201ENST00000493781 261 ntBASIC10.49□□□□□ -0.73
CMC4P56277 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC10.49□□□□□ -0.73
CMC4P56277 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 AC079336.7-201ENST00000623428 1078 ntBASIC10.49□□□□□ -0.73
CMC4P56277 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 AC027601.5-201ENST00000624065 2482 ntBASIC10.49□□□□□ -0.73
CMC4P56277 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.49□□□□□ -0.73
CMC4P56277 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms