Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 AC006122.1-201ENST00000493323 440 ntBASIC13.41□□□□□ -0.26
CASP9P55211 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.41□□□□□ -0.26
CASP9P55211 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.41□□□□□ -0.26
CASP9P55211 AC079316.1-201ENST00000548397 411 ntBASIC13.41□□□□□ -0.26
CASP9P55211 AL160314.3-201ENST00000556041 767 ntBASIC13.41□□□□□ -0.26
CASP9P55211 AC005730.2-201ENST00000564549 1184 ntBASIC13.41□□□□□ -0.26
CASP9P55211 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.41□□□□□ -0.26
CASP9P55211 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.41□□□□□ -0.26
CASP9P55211 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.41□□□□□ -0.26
CASP9P55211 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 FP325330.2-201ENST00000624219 5630 ntBASIC13.41□□□□□ -0.26
CASP9P55211 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 AC114271.1-201ENST00000612689 2813 ntBASIC13.4□□□□□ -0.26
CASP9P55211 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CASP9P55211 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 AC135782.3-201ENST00000562782 2105 ntBASIC13.4□□□□□ -0.26
CASP9P55211 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
CASP9P55211 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.4□□□□□ -0.26
CASP9P55211 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.4□□□□□ -0.26
CASP9P55211 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.4□□□□□ -0.26
CASP9P55211 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CASP9P55211 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CASP9P55211 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CASP9P55211 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CASP9P55211 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.4□□□□□ -0.26
CASP9P55211 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.4□□□□□ -0.26
CASP9P55211 AC009884.2-201ENST00000603110 324 ntBASIC13.4□□□□□ -0.26
CASP9P55211 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 AC244157.2-201ENST00000616239 1006 ntBASIC13.4□□□□□ -0.26
CASP9P55211 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CASP9P55211 AC009542.2-202ENST00000619004 1067 ntBASIC13.4□□□□□ -0.26
CASP9P55211 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.4□□□□□ -0.26
CASP9P55211 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.4□□□□□ -0.26
CASP9P55211 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.4□□□□□ -0.26
CASP9P55211 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CASP9P55211 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CASP9P55211 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.4□□□□□ -0.26
CASP9P55211 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CASP9P55211 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CASP9P55211 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
CASP9P55211 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CASP9P55211 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CASP9P55211 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.39□□□□□ -0.27
CASP9P55211 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CASP9P55211 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CASP9P55211 LINC00115-201ENST00000473798 1317 ntBASIC13.39□□□□□ -0.27
CASP9P55211 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.39□□□□□ -0.27
CASP9P55211 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CASP9P55211 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CASP9P55211 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms