Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 AL049840.2-201ENST00000602722 535 ntBASIC12.53□□□□□ -0.4
LHX2P50458 AP003419.4-201ENST00000616071 517 ntBASIC12.53□□□□□ -0.4
LHX2P50458 CR392039.2-201ENST00000623182 509 ntBASIC12.53□□□□□ -0.4
LHX2P50458 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.53□□□□□ -0.4
LHX2P50458 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.53□□□□□ -0.4
LHX2P50458 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LHX2P50458 AC093462.1-201ENST00000621167 1683 ntBASIC12.53□□□□□ -0.4
LHX2P50458 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.53□□□□□ -0.4
LHX2P50458 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
LHX2P50458 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.53□□□□□ -0.4
LHX2P50458 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.53□□□□□ -0.4
LHX2P50458 AC090502.4-201ENST00000551714 1386 ntBASIC12.53□□□□□ -0.4
LHX2P50458 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LHX2P50458 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LHX2P50458 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LHX2P50458 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
LHX2P50458 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.52□□□□□ -0.4
LHX2P50458 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LHX2P50458 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.4
LHX2P50458 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.52□□□□□ -0.4
LHX2P50458 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.52□□□□□ -0.4
LHX2P50458 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.52□□□□□ -0.4
LHX2P50458 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.52□□□□□ -0.4
LHX2P50458 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
LHX2P50458 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.52□□□□□ -0.4
LHX2P50458 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.52□□□□□ -0.4
LHX2P50458 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LHX2P50458 IL9RP3-201ENST00000442856 1674 ntBASIC12.52□□□□□ -0.4
LHX2P50458 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
LHX2P50458 PES1P2-201ENST00000449745 1735 ntBASIC12.52□□□□□ -0.41
LHX2P50458 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LHX2P50458 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 RPL17P11-201ENST00000417593 544 ntBASIC12.52□□□□□ -0.41
LHX2P50458 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.52□□□□□ -0.41
LHX2P50458 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.52□□□□□ -0.41
LHX2P50458 AC005722.1-201ENST00000431878 964 ntBASIC12.52□□□□□ -0.41
LHX2P50458 EEF1DP2-201ENST00000433698 843 ntBASIC12.52□□□□□ -0.41
LHX2P50458 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.52□□□□□ -0.41
LHX2P50458 LYPLA2P1-203ENST00000447689 696 ntBASIC12.52□□□□□ -0.41
LHX2P50458 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.52□□□□□ -0.41
LHX2P50458 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.52□□□□□ -0.41
LHX2P50458 IGHV1-12-201ENST00000518307 205 ntBASIC12.52□□□□□ -0.41
LHX2P50458 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.52□□□□□ -0.41
LHX2P50458 AP003398.1-201ENST00000531124 318 ntBASIC12.52□□□□□ -0.41
LHX2P50458 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.52□□□□□ -0.41
LHX2P50458 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.52□□□□□ -0.41
LHX2P50458 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.52□□□□□ -0.41
LHX2P50458 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.52□□□□□ -0.41
LHX2P50458 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LHX2P50458 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
LHX2P50458 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.52□□□□□ -0.41
LHX2P50458 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.52□□□□□ -0.41
LHX2P50458 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LHX2P50458 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
LHX2P50458 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 AC005840.4-201ENST00000541242 2494 ntBASIC12.52□□□□□ -0.41
LHX2P50458 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LHX2P50458 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LHX2P50458 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
LHX2P50458 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
LHX2P50458 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.52□□□□□ -0.41
LHX2P50458 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LHX2P50458 FMO6P-201ENST00000236166 1620 ntBASIC12.51□□□□□ -0.41
LHX2P50458 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 AL928921.2-201ENST00000641325 2442 ntBASIC12.51□□□□□ -0.41
LHX2P50458 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms