Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 CCDC126-201ENST00000307471 2473 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 EIF3C-202ENST00000395587 3137 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 HNRNPR-202ENST00000374612 2694 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 MARK2P16-201ENST00000605714 1723 ntBASIC9□□□□□ -0.97
PCP4P48539 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 LINC01777-201ENST00000423197 2077 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 AC026336.3-201ENST00000611525 2076 ntBASIC9□□□□□ -0.97
PCP4P48539 SALL1-202ENST00000440970 5253 ntTSL 5 BASIC9□□□□□ -0.97
PCP4P48539 AC091078.3-201ENST00000556708 2284 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC9□□□□□ -0.97
PCP4P48539 SPDYE1-201ENST00000258704 2649 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 ELP6-205ENST00000439305 880 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 AC243972.2-201ENST00000541653 991 ntBASIC9□□□□□ -0.97
PCP4P48539 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC9□□□□□ -0.97
PCP4P48539 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC9□□□□□ -0.97
PCP4P48539 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC9□□□□□ -0.97
PCP4P48539 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 EIF4B-202ENST00000416762 1985 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 AL356273.3-201ENST00000623474 1989 ntBASIC9□□□□□ -0.97
PCP4P48539 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 KIF23-207ENST00000559279 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC9□□□□□ -0.97
PCP4P48539 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC9□□□□□ -0.97
PCP4P48539 AL138799.1-201ENST00000448213 1675 ntBASIC9□□□□□ -0.97
PCP4P48539 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 ELOVL7-201ENST00000425382 3827 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 SNX16-203ENST00000396330 3452 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC9□□□□□ -0.97
PCP4P48539 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC9□□□□□ -0.97
PCP4P48539 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC9□□□□□ -0.97
PCP4P48539 METTL22-202ENST00000381920 4984 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
PCP4P48539 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
PCP4P48539 TTC25-201ENST00000377540 2255 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCP4P48539 AC005722.2-201ENST00000577087 3370 ntBASIC8.99□□□□□ -0.97
PCP4P48539 RRP12-211ENST00000536831 4476 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
PCP4P48539 ANGPT4-201ENST00000381922 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 CICP9-201ENST00000444451 1913 ntBASIC8.99□□□□□ -0.97
PCP4P48539 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC8.99□□□□□ -0.97
PCP4P48539 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
PCP4P48539 POLR2M-201ENST00000299638 4199 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 KDM4E-201ENST00000450979 2339 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
PCP4P48539 MUC21-202ENST00000486149 2527 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC8.99□□□□□ -0.97
PCP4P48539 DGKA-201ENST00000331886 2909 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PCP4P48539 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC8.99□□□□□ -0.97
PCP4P48539 AL592158.1-201ENST00000632210 4477 ntBASIC8.99□□□□□ -0.97
PCP4P48539 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
PCP4P48539 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 CDY3P-201ENST00000454543 1618 ntBASIC8.99□□□□□ -0.97
PCP4P48539 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 VSTM5-202ENST00000409977 2969 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PCP4P48539 LAMC2-204ENST00000493293 4313 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 UHRF1-201ENST00000612630 4309 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 ACRV1-204ENST00000533904 2212 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 PROM2-202ENST00000317668 3824 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 NPIPA5-201ENST00000360151 1088 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 ENSA-206ENST00000361631 725 ntTSL 2 BASIC8.99□□□□□ -0.97
PCP4P48539 NPM1P51-201ENST00000443470 744 ntBASIC8.99□□□□□ -0.97
PCP4P48539 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC8.99□□□□□ -0.97
PCP4P48539 AC046168.1-201ENST00000561283 3814 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC8.99□□□□□ -0.97
PCP4P48539 JPT2-214ENST00000569765 782 ntTSL 2 BASIC8.99□□□□□ -0.97
PCP4P48539 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC8.99□□□□□ -0.97
PCP4P48539 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
PCP4P48539 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
PCP4P48539 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PCP4P48539 PCDHGB6-202ENST00000616430 4601 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms