RNA–Protein interactions for RNA: ENST00000389658.3

LAMA1-201, Transcript of laminin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA1, Length 9,657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-201ENST00000389658 DCAF8L2P0C7V8 631 aa16.94■□□□□ 0.3
LAMA1-201ENST00000389658 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.22
LAMA1-201ENST00000389658 MYT1Q01538 1121 aa16.18■□□□□ 0.18
LAMA1-201ENST00000389658 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
LAMA1-201ENST00000389658 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
LAMA1-201ENST00000389658 ERICH6Q7L0X2 663 aa15.8■□□□□ 0.12
LAMA1-201ENST00000389658 APLP2Q06481 763 aa15.78■□□□□ 0.12
LAMA1-201ENST00000389658 CCER1Q8TC90 406 aaPredicted RBP15.7■□□□□ 0.1
LAMA1-201ENST00000389658 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
LAMA1-201ENST00000389658 FAM9AQ8IZU1 332 aaPredicted RBP15.58■□□□□ 0.08
LAMA1-201ENST00000389658 CENPBP07199 599 aaPredicted RBP15.51■□□□□ 0.07
LAMA1-201ENST00000389658 TTBK1Q5TCY1 1321 aaPredicted RBP15.39■□□□□ 0.05
LAMA1-201ENST00000389658 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
LAMA1-201ENST00000389658 NEFLP07196 543 aa15.29■□□□□ 0.04
LAMA1-201ENST00000389658 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
LAMA1-201ENST00000389658 NISCHQ9Y2I1 1504 aa15.24■□□□□ 0.03
LAMA1-201ENST00000389658 RANGAP1P46060 587 aaPredicted RBP15.13■□□□□ 0.01
LAMA1-201ENST00000389658 ATP1B4Q9UN42 357 aaPredicted RBP15.12■□□□□ 0.01
LAMA1-201ENST00000389658 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
LAMA1-201ENST00000389658 DAXXQ9UER7 740 aaPredicted RBP15.06■□□□□ 0
LAMA1-201ENST00000389658 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
LAMA1-201ENST00000389658 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
LAMA1-201ENST00000389658 POLR3GLQ9BT43 218 aa14.7□□□□□ -0.06
LAMA1-201ENST00000389658 ZNF316A6NFI3 1004 aaPredicted RBP14.67□□□□□ -0.06
LAMA1-201ENST00000389658 MYT1LQ9UL68 1186 aa14.65□□□□□ -0.07
LAMA1-201ENST00000389658 RTL5Q5HYW3 569 aaPredicted RBP14.64□□□□□ -0.07
LAMA1-201ENST00000389658 PPARGC1BQ86YN6 1023 aaKnown RBP14.58□□□□□ -0.07
LAMA1-201ENST00000389658 CLSPNQ9HAW4 1339 aa14.56□□□□□ -0.08
LAMA1-201ENST00000389658 TRIM26Q12899 539 aaPredicted RBP14.54□□□□□ -0.08
LAMA1-201ENST00000389658 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
LAMA1-201ENST00000389658 ITGAEP38570 1179 aa14.51□□□□□ -0.09
LAMA1-201ENST00000389658 CNGB1Q14028 1251 aaPredicted RBP14.51□□□□□ -0.09
LAMA1-201ENST00000389658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
LAMA1-201ENST00000389658 HNRNPUL2Q1KMD3 747 aaKnown RBP14.49□□□□□ -0.09
LAMA1-201ENST00000389658 HRCP23327 699 aa14.45□□□□□ -0.1
LAMA1-201ENST00000389658 CHIC1Q5VXU3 224 aa14.43□□□□□ -0.1
LAMA1-201ENST00000389658 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
LAMA1-201ENST00000389658 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
LAMA1-201ENST00000389658 CDK11AQ9UQ88 783 aaPredicted RBP14.18□□□□□ -0.14
LAMA1-201ENST00000389658 BCANQ96GW7 911 aa14.12□□□□□ -0.15
LAMA1-201ENST00000389658 CANXP27824 592 aaKnown RBP14.11□□□□□ -0.15
LAMA1-201ENST00000389658 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
LAMA1-201ENST00000389658 SLC24A1O60721 1099 aa14.1□□□□□ -0.15
LAMA1-201ENST00000389658 TRIM52Q96A61 297 aa14.08□□□□□ -0.16
LAMA1-201ENST00000389658 BCL11AQ9H165 835 aa14.07□□□□□ -0.16
LAMA1-201ENST00000389658 ANP32CO43423 234 aa14.07□□□□□ -0.16
LAMA1-201ENST00000389658 LOC105371045A0A1W2PR82 267 aa14.05□□□□□ -0.16
LAMA1-201ENST00000389658 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
LAMA1-201ENST00000389658 ANP32AP39687 249 aaKnown RBP14.02□□□□□ -0.17
LAMA1-201ENST00000389658 ANP32BQ92688 251 aaKnown RBP14.01□□□□□ -0.17
LAMA1-201ENST00000389658 NEFMP07197 916 aa14.01□□□□□ -0.17
LAMA1-201ENST00000389658 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
LAMA1-201ENST00000389658 ZNF326Q5BKZ1 582 aaKnown RBP13.98□□□□□ -0.17
LAMA1-201ENST00000389658 GLIPR1L2Q4G1C9 344 aa13.97□□□□□ -0.17
LAMA1-201ENST00000389658 EIF5BO60841 1220 aaKnown RBP13.94□□□□□ -0.18
LAMA1-201ENST00000389658 HSP90AA1P07900 732 aaKnown RBP13.9□□□□□ -0.19
LAMA1-201ENST00000389658 NPM2Q86SE8 214 aaKnown RBP13.88□□□□□ -0.19
LAMA1-201ENST00000389658 UPF2Q9HAU5 1272 aaKnown RBP13.81□□□□□ -0.2
LAMA1-201ENST00000389658 ACIN1Q9UKV3 1341 aaKnown RBP13.67□□□□□ -0.22
LAMA1-201ENST00000389658 CDK11BP21127 795 aaKnown RBP13.67□□□□□ -0.22
LAMA1-201ENST00000389658 FBLN2P98095 1184 aa13.65□□□□□ -0.22
LAMA1-201ENST00000389658 FKBP8Q14318 412 aa13.63□□□□□ -0.23
LAMA1-201ENST00000389658 ARXQ96QS3 562 aa13.62□□□□□ -0.23
LAMA1-201ENST00000389658 NBR1Q14596 966 aa13.61□□□□□ -0.23
LAMA1-201ENST00000389658 ESF1Q9H501 851 aaKnown RBP13.58□□□□□ -0.24
LAMA1-201ENST00000389658 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.58□□□□□ -0.24
LAMA1-201ENST00000389658 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
LAMA1-201ENST00000389658 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
LAMA1-201ENST00000389658 ZNF777Q9ULD5 760 aaPredicted RBP13.54□□□□□ -0.24
LAMA1-201ENST00000389658 CCDC136Q96JN2 1154 aa13.53□□□□□ -0.24
LAMA1-201ENST00000389658 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
LAMA1-201ENST00000389658 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
LAMA1-201ENST00000389658 ARID3CA6NKF2 412 aa13.51□□□□□ -0.25
LAMA1-201ENST00000389658 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
LAMA1-201ENST00000389658 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
LAMA1-201ENST00000389658 CHGAP10645 457 aaKnown RBP13.48□□□□□ -0.25
LAMA1-201ENST00000389658 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
LAMA1-201ENST00000389658 TNNT2P45379 298 aaPredicted RBP13.47□□□□□ -0.25
LAMA1-201ENST00000389658 P3H3Q8IVL6 736 aa13.47□□□□□ -0.25
LAMA1-201ENST00000389658 WDR43Q15061 677 aaKnown RBP eCLIP13.46□□□□□ -0.25
LAMA1-201ENST00000389658 TMC1Q8TDI8 760 aa13.46□□□□□ -0.26
LAMA1-201ENST00000389658 NCLP19338 710 aaKnown RBP13.45□□□□□ -0.26
LAMA1-201ENST00000389658 BECN1Q14457 450 aa13.42□□□□□ -0.26
LAMA1-201ENST00000389658 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
LAMA1-201ENST00000389658 ANP32EQ9BTT0 268 aa13.4□□□□□ -0.26
LAMA1-201ENST00000389658 DDRGK1Q96HY6 314 aa13.4□□□□□ -0.26
LAMA1-201ENST00000389658 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
LAMA1-201ENST00000389658 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
LAMA1-201ENST00000389658 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
LAMA1-201ENST00000389658 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
LAMA1-201ENST00000389658 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
LAMA1-201ENST00000389658 A0A0G2JS52 829 aa13.35□□□□□ -0.27
LAMA1-201ENST00000389658 PTMAP06454 111 aaKnown RBP13.35□□□□□ -0.27
LAMA1-201ENST00000389658 DNTTIP2Q5QJE6 756 aaKnown RBP13.34□□□□□ -0.27
LAMA1-201ENST00000389658 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
LAMA1-201ENST00000389658 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
LAMA1-201ENST00000389658 ABCC9O60706 1549 aa13.29□□□□□ -0.28
LAMA1-201ENST00000389658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
LAMA1-201ENST00000389658 IRX6P78412 446 aaPredicted RBP13.27□□□□□ -0.29
LAMA1-201ENST00000389658 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms