Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
LTBRP36941 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 SNORA30.1-201ENST00000363193 129 ntBASIC14.15□□□□□ -0.14
LTBRP36941 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 MIR181D-201ENST00000384853 137 ntBASIC14.15□□□□□ -0.14
LTBRP36941 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC14.15□□□□□ -0.14
LTBRP36941 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC14.15□□□□□ -0.14
LTBRP36941 AP001102.1-201ENST00000528959 409 ntBASIC14.15□□□□□ -0.14
LTBRP36941 AC005332.2-201ENST00000590010 930 ntBASIC14.15□□□□□ -0.14
LTBRP36941 AL078624.1-201ENST00000604004 547 ntBASIC14.15□□□□□ -0.14
LTBRP36941 AC211476.2-201ENST00000608799 708 ntBASIC14.15□□□□□ -0.14
LTBRP36941 AC244097.1-201ENST00000621631 1216 ntBASIC14.15□□□□□ -0.14
LTBRP36941 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 SNORA50D-202ENST00000627561 132 ntBASIC14.15□□□□□ -0.14
LTBRP36941 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.15□□□□□ -0.14
LTBRP36941 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 AC008741.2-201ENST00000612792 3115 ntBASIC14.15□□□□□ -0.14
LTBRP36941 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 AC012617.1-204ENST00000586340 2305 ntBASIC14.15□□□□□ -0.14
LTBRP36941 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
LTBRP36941 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBRP36941 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBRP36941 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBRP36941 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBRP36941 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 AC024075.2-201ENST00000598112 1473 ntBASIC14.14□□□□□ -0.15
LTBRP36941 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
LTBRP36941 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 AL031577.1-201ENST00000339867 399 ntBASIC14.14□□□□□ -0.15
LTBRP36941 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LTBRP36941 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 MKL1-204ENST00000402630 747 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 CACYBPP3-201ENST00000406011 625 ntBASIC14.14□□□□□ -0.15
LTBRP36941 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBRP36941 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC14.14□□□□□ -0.15
LTBRP36941 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC14.14□□□□□ -0.15
LTBRP36941 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC14.14□□□□□ -0.15
LTBRP36941 RPL35P1-201ENST00000450819 370 ntBASIC14.14□□□□□ -0.15
LTBRP36941 RN7SL69P-201ENST00000468423 272 ntBASIC14.14□□□□□ -0.15
LTBRP36941 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 HAX1-211ENST00000532105 771 ntTSL 3 BASIC14.14□□□□□ -0.15
LTBRP36941 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBRP36941 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC14.14□□□□□ -0.15
LTBRP36941 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC14.14□□□□□ -0.15
LTBRP36941 AC010503.4-201ENST00000615487 688 ntBASIC14.14□□□□□ -0.15
LTBRP36941 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LTBRP36941 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBRP36941 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBRP36941 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBRP36941 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LTBRP36941 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms