Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.27□□□□□ -0.13
XPAP23025 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.27□□□□□ -0.13
XPAP23025 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.27□□□□□ -0.13
XPAP23025 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.27□□□□□ -0.13
XPAP23025 KRT18P15-201ENST00000458108 1291 ntBASIC14.27□□□□□ -0.13
XPAP23025 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.27□□□□□ -0.13
XPAP23025 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.27□□□□□ -0.13
XPAP23025 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.27□□□□□ -0.13
XPAP23025 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.27□□□□□ -0.13
XPAP23025 PRKXP1-201ENST00000561423 1122 ntBASIC14.27□□□□□ -0.13
XPAP23025 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.27□□□□□ -0.13
XPAP23025 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.27□□□□□ -0.13
XPAP23025 AC016629.1-201ENST00000596579 586 ntBASIC14.27□□□□□ -0.13
XPAP23025 AL021707.6-201ENST00000609212 491 ntBASIC14.27□□□□□ -0.13
XPAP23025 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.27□□□□□ -0.13
XPAP23025 AC051619.9-201ENST00000623237 597 ntBASIC14.27□□□□□ -0.13
XPAP23025 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.27□□□□□ -0.13
XPAP23025 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
XPAP23025 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.27□□□□□ -0.13
XPAP23025 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
XPAP23025 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
XPAP23025 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 AL591122.2-201ENST00000624125 1853 ntBASIC14.27□□□□□ -0.13
XPAP23025 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.27□□□□□ -0.13
XPAP23025 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XPAP23025 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.26□□□□□ -0.13
XPAP23025 AC117489.1-201ENST00000625169 3217 ntBASIC14.26□□□□□ -0.13
XPAP23025 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.26□□□□□ -0.13
XPAP23025 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.26□□□□□ -0.13
XPAP23025 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.26□□□□□ -0.13
XPAP23025 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.26□□□□□ -0.13
XPAP23025 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.26□□□□□ -0.13
XPAP23025 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.26□□□□□ -0.13
XPAP23025 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 AC023908.3-201ENST00000564211 3047 ntBASIC14.26□□□□□ -0.13
XPAP23025 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
XPAP23025 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
XPAP23025 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XPAP23025 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.25□□□□□ -0.13
XPAP23025 CSPG4P11-201ENST00000560634 4910 ntBASIC14.25□□□□□ -0.13
XPAP23025 RPL13AP3-202ENST00000494676 1473 ntBASIC14.25□□□□□ -0.13
XPAP23025 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
XPAP23025 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.25□□□□□ -0.13
XPAP23025 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
XPAP23025 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.25□□□□□ -0.13
XPAP23025 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.25□□□□□ -0.13
XPAP23025 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms