Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 KLF17P1-201ENST00000547105 1126 ntBASIC15.5■□□□□ 0.07
GAP43P17677 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 RN7SL665P-201ENST00000578793 300 ntBASIC15.5■□□□□ 0.07
GAP43P17677 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
GAP43P17677 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
GAP43P17677 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.5■□□□□ 0.07
GAP43P17677 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 AC138969.2-201ENST00000532739 9932 ntBASIC15.5■□□□□ 0.07
GAP43P17677 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.5■□□□□ 0.07
GAP43P17677 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GAP43P17677 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
GAP43P17677 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
GAP43P17677 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
GAP43P17677 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
GAP43P17677 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.49■□□□□ 0.07
GAP43P17677 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 AL583805.1-201ENST00000391389 531 ntBASIC15.49■□□□□ 0.07
GAP43P17677 AC098934.1-203ENST00000442868 1262 ntBASIC15.49■□□□□ 0.07
GAP43P17677 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.49■□□□□ 0.07
GAP43P17677 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.49■□□□□ 0.07
GAP43P17677 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
GAP43P17677 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
GAP43P17677 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 AL359845.1-201ENST00000458202 1648 ntBASIC15.49■□□□□ 0.07
GAP43P17677 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 AC020917.4-201ENST00000623994 1999 ntBASIC15.49■□□□□ 0.07
GAP43P17677 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
GAP43P17677 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
GAP43P17677 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.49■□□□□ 0.07
GAP43P17677 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GAP43P17677 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.49■□□□□ 0.07
GAP43P17677 AC135782.3-201ENST00000562782 2105 ntBASIC15.49■□□□□ 0.07
GAP43P17677 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
GAP43P17677 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
GAP43P17677 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
GAP43P17677 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.48■□□□□ 0.07
GAP43P17677 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
GAP43P17677 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAP43P17677 OR2K2-202ENST00000374428 1038 ntBASIC15.48■□□□□ 0.07
GAP43P17677 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
GAP43P17677 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
GAP43P17677 RPL18AP8-201ENST00000486071 528 ntBASIC15.48■□□□□ 0.07
GAP43P17677 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
GAP43P17677 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.48■□□□□ 0.07
GAP43P17677 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.48■□□□□ 0.07
GAP43P17677 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.48■□□□□ 0.07
GAP43P17677 AC132825.4-202ENST00000578792 434 ntBASIC15.48■□□□□ 0.07
GAP43P17677 MIR3677-201ENST00000578964 60 ntBASIC15.48■□□□□ 0.07
GAP43P17677 AC007326.1-201ENST00000604539 458 ntBASIC15.48■□□□□ 0.07
GAP43P17677 AF254983.2-201ENST00000612331 135 ntBASIC15.48■□□□□ 0.07
GAP43P17677 AC009560.1-201ENST00000620208 434 ntBASIC15.48■□□□□ 0.07
GAP43P17677 AC091812.3-201ENST00000621362 345 ntBASIC15.48■□□□□ 0.07
GAP43P17677 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms