Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.17□□□□□ -0.3
PRKCAP17252 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 VDAC1P1-201ENST00000439229 848 ntBASIC13.17□□□□□ -0.3
PRKCAP17252 PFN1P12-201ENST00000455938 534 ntBASIC13.17□□□□□ -0.3
PRKCAP17252 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.17□□□□□ -0.3
PRKCAP17252 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.17□□□□□ -0.3
PRKCAP17252 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.17□□□□□ -0.3
PRKCAP17252 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.17□□□□□ -0.3
PRKCAP17252 AC008805.1-201ENST00000590892 364 ntBASIC13.17□□□□□ -0.3
PRKCAP17252 AP000346.4-201ENST00000614827 381 ntBASIC13.17□□□□□ -0.3
PRKCAP17252 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.17□□□□□ -0.3
PRKCAP17252 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 TCAM1P-207ENST00000485295 1537 ntBASIC13.17□□□□□ -0.3
PRKCAP17252 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PRKCAP17252 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PRKCAP17252 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PRKCAP17252 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.16□□□□□ -0.3
PRKCAP17252 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PRKCAP17252 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PRKCAP17252 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PRKCAP17252 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PRKCAP17252 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.16□□□□□ -0.3
PRKCAP17252 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.16□□□□□ -0.3
PRKCAP17252 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.16□□□□□ -0.3
PRKCAP17252 ACTBP11-201ENST00000436287 1126 ntBASIC13.16□□□□□ -0.3
PRKCAP17252 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 AC104306.2-201ENST00000451877 341 ntBASIC13.16□□□□□ -0.3
PRKCAP17252 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.16□□□□□ -0.3
PRKCAP17252 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.16□□□□□ -0.3
PRKCAP17252 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.16□□□□□ -0.3
PRKCAP17252 SCARNA21-201ENST00000517026 139 ntBASIC13.16□□□□□ -0.3
PRKCAP17252 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.16□□□□□ -0.3
PRKCAP17252 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.16□□□□□ -0.3
PRKCAP17252 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.16□□□□□ -0.3
PRKCAP17252 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.16□□□□□ -0.3
PRKCAP17252 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRKCAP17252 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PRKCAP17252 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
PRKCAP17252 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRKCAP17252 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.15□□□□□ -0.3
PRKCAP17252 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRKCAP17252 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRKCAP17252 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.15□□□□□ -0.3
PRKCAP17252 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRKCAP17252 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms