Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 OR2A5-201ENST00000408906 1013 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USH2AO75445 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 AC131274.3-201ENST00000578745 1271 ntBASIC6.03□□□□□ -1.44
USH2AO75445 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 UBR1-212ENST00000627960 189 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 AL162727.3-201ENST00000635661 2787 ntBASIC6.03□□□□□ -1.44
USH2AO75445 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC6.03□□□□□ -1.44
USH2AO75445 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
USH2AO75445 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 AC007322.2-201ENST00000414540 605 ntBASIC6.03□□□□□ -1.44
USH2AO75445 RN7SL328P-201ENST00000484033 300 ntBASIC6.03□□□□□ -1.44
USH2AO75445 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 MYADML-202ENST00000490394 797 ntTSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC6.03□□□□□ -1.44
USH2AO75445 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC6.03□□□□□ -1.44
USH2AO75445 AC090095.1-201ENST00000519275 871 ntBASIC6.03□□□□□ -1.44
USH2AO75445 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 HLA-DQB2-231ENST00000435145 2026 ntBASIC6.03□□□□□ -1.44
USH2AO75445 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
USH2AO75445 AP005117.1-202ENST00000581724 1908 ntBASIC6.03□□□□□ -1.44
USH2AO75445 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC6.03□□□□□ -1.44
USH2AO75445 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 SERF2-205ENST00000403425 690 ntTSL 2 BASIC6.03□□□□□ -1.44
USH2AO75445 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC6.03□□□□□ -1.44
USH2AO75445 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USH2AO75445 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC6.03□□□□□ -1.44
USH2AO75445 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 MYB-242ENST00000618728 3545 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 KRT41P-201ENST00000393988 1293 ntBASIC6.02□□□□□ -1.44
USH2AO75445 HTATSF1P1-201ENST00000432008 984 ntBASIC6.02□□□□□ -1.44
USH2AO75445 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
USH2AO75445 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
USH2AO75445 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
USH2AO75445 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.44
USH2AO75445 MESTP2-201ENST00000559787 889 ntBASIC6.02□□□□□ -1.44
USH2AO75445 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC6.02□□□□□ -1.44
USH2AO75445 AC005586.2-201ENST00000563946 837 ntBASIC6.02□□□□□ -1.44
USH2AO75445 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC6.02□□□□□ -1.44
USH2AO75445 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC6.02□□□□□ -1.44
USH2AO75445 AC089987.1-202ENST00000641959 426 ntBASIC6.02□□□□□ -1.44
USH2AO75445 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 HP-203ENST00000357763 1482 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 LINC01515-201ENST00000433152 1339 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms