Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 KRT18P9-201ENST00000604826 1300 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 AL031595.1-201ENST00000623969 4709 ntBASIC14.32□□□□□ -0.12
SEMA3CQ99985 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 BX679664.3-201ENST00000414070 555 ntBASIC14.32□□□□□ -0.12
SEMA3CQ99985 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 AL133466.1-201ENST00000447582 150 ntBASIC14.32□□□□□ -0.12
SEMA3CQ99985 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 AC113935.1-201ENST00000471722 555 ntBASIC14.32□□□□□ -0.12
SEMA3CQ99985 RN7SL258P-201ENST00000478664 300 ntBASIC14.32□□□□□ -0.12
SEMA3CQ99985 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 RTN3P1-201ENST00000536295 711 ntBASIC14.32□□□□□ -0.12
SEMA3CQ99985 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 FAM90A12P-201ENST00000519497 2375 ntBASIC14.32□□□□□ -0.12
SEMA3CQ99985 FAM90A24P-201ENST00000520792 2369 ntBASIC14.32□□□□□ -0.12
SEMA3CQ99985 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA3CQ99985 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA3CQ99985 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA3CQ99985 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 FTLP1-201ENST00000449155 526 ntBASIC14.31□□□□□ -0.12
SEMA3CQ99985 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.31□□□□□ -0.12
SEMA3CQ99985 RN7SL720P-201ENST00000488178 304 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms