Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AC020910.5-201ENST00000623668 1865 ntBASIC12.27□□□□□ -0.45
BEST4Q8NFU0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 DDX12P-201ENST00000432996 2947 ntBASIC12.27□□□□□ -0.45
BEST4Q8NFU0 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 LINC00638-201ENST00000555578 2518 ntBASIC12.26□□□□□ -0.45
BEST4Q8NFU0 PTPRVP-205ENST00000641549 5067 ntBASIC12.26□□□□□ -0.45
BEST4Q8NFU0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 USP17L6P-201ENST00000382470 1197 ntBASIC12.26□□□□□ -0.45
BEST4Q8NFU0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 AC027237.1-201ENST00000560942 655 ntBASIC12.26□□□□□ -0.45
BEST4Q8NFU0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 KRT18P8-201ENST00000581937 1246 ntBASIC12.26□□□□□ -0.45
BEST4Q8NFU0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 MAPK10-262ENST00000641051 5738 ntBASIC12.26□□□□□ -0.45
BEST4Q8NFU0 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BEST4Q8NFU0 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 PUDPP3-201ENST00000445368 636 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms