Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 AL928654.5-201ENST00000624831 2501 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 AC064801.2-201ENST00000625052 1303 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 AC092053.3-201ENST00000641308 4975 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 AC107375.1-201ENST00000564464 2231 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 MIR1202-201ENST00000408529 83 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 POM121L8P-201ENST00000417732 1281 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 AC007274.1-201ENST00000439805 662 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 POM121L9P-203ENST00000441984 1285 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 AL590640.2-201ENST00000457038 527 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 AC026434.2-201ENST00000506094 1078 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ECM1P1-201ENST00000604092 1279 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ABCD1P2-201ENST00000429313 1601 ntBASIC12.65□□□□□ -0.38
LRRC28Q86X40 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LRRC28Q86X40 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
LRRC28Q86X40 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LRRC28Q86X40 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
LRRC28Q86X40 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
LRRC28Q86X40 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.65□□□□□ -0.39
LRRC28Q86X40 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
LRRC28Q86X40 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 AL445250.1-201ENST00000641671 2259 ntBASIC12.64□□□□□ -0.39
LRRC28Q86X40 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 AL022313.4-201ENST00000562756 2046 ntBASIC12.64□□□□□ -0.39
LRRC28Q86X40 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.64□□□□□ -0.39
LRRC28Q86X40 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 VENTXP1-201ENST00000569334 2716 ntBASIC12.64□□□□□ -0.39
LRRC28Q86X40 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms