Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RN7SL470P-201ENST00000583069 259 ntBASIC10.36□□□□□ -0.75
APOC4P55056 AP005264.5-201ENST00000590066 467 ntBASIC10.36□□□□□ -0.75
APOC4P55056 SPCS2P2-201ENST00000603270 608 ntBASIC10.36□□□□□ -0.75
APOC4P55056 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
APOC4P55056 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.36□□□□□ -0.75
APOC4P55056 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC10.36□□□□□ -0.75
APOC4P55056 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC10.36□□□□□ -0.75
APOC4P55056 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC10.36□□□□□ -0.75
APOC4P55056 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.36□□□□□ -0.75
APOC4P55056 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.36□□□□□ -0.75
APOC4P55056 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
APOC4P55056 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC10.36□□□□□ -0.75
APOC4P55056 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
APOC4P55056 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
APOC4P55056 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
APOC4P55056 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.36□□□□□ -0.75
APOC4P55056 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.35□□□□□ -0.75
APOC4P55056 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 DUT-208ENST00000559540 1441 ntTSL 2 BASIC10.35□□□□□ -0.75
APOC4P55056 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.35□□□□□ -0.75
APOC4P55056 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.35□□□□□ -0.75
APOC4P55056 TCAM1P-207ENST00000485295 1537 ntBASIC10.35□□□□□ -0.75
APOC4P55056 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 PYY2-201ENST00000315776 282 ntBASIC10.35□□□□□ -0.75
APOC4P55056 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC10.35□□□□□ -0.75
APOC4P55056 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 GUSBP10-201ENST00000417412 665 ntBASIC10.35□□□□□ -0.75
APOC4P55056 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 BUD31-205ENST00000456893 512 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 SCARNA12-201ENST00000459155 270 ntBASIC10.35□□□□□ -0.75
APOC4P55056 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC10.35□□□□□ -0.75
APOC4P55056 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
APOC4P55056 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC10.35□□□□□ -0.75
APOC4P55056 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC10.35□□□□□ -0.75
APOC4P55056 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 AC132825.4-202ENST00000578792 434 ntBASIC10.35□□□□□ -0.75
APOC4P55056 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 MIR2392-201ENST00000584881 84 ntBASIC10.35□□□□□ -0.75
APOC4P55056 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 AC092171.5-201ENST00000608012 942 ntBASIC10.35□□□□□ -0.75
APOC4P55056 AC073352.2-201ENST00000609385 439 ntBASIC10.35□□□□□ -0.75
APOC4P55056 AL359091.4-201ENST00000610052 409 ntBASIC10.35□□□□□ -0.75
APOC4P55056 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
APOC4P55056 MIR7845-201ENST00000618396 99 ntBASIC10.35□□□□□ -0.75
APOC4P55056 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 AP001184.1-201ENST00000637936 376 ntBASIC10.35□□□□□ -0.75
APOC4P55056 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms