Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 WFDC1-204ENST00000613603 549 ntBASIC15.43■□□□□ 0.06
CCDC66A2RUB6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 FKBP4P6-201ENST00000457486 1332 ntBASIC15.43■□□□□ 0.06
CCDC66A2RUB6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC66A2RUB6 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 AC027369.3-201ENST00000530465 3707 ntBASIC15.42■□□□□ 0.06
CCDC66A2RUB6 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 PUDPP3-201ENST00000445368 636 ntBASIC15.42■□□□□ 0.06
CCDC66A2RUB6 TERF1P3-201ENST00000505638 1227 ntBASIC15.42■□□□□ 0.06
CCDC66A2RUB6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 AC008494.3-201ENST00000606615 944 ntBASIC15.42■□□□□ 0.06
CCDC66A2RUB6 AC145423.3-201ENST00000615987 467 ntBASIC15.42■□□□□ 0.06
CCDC66A2RUB6 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.42■□□□□ 0.06
CCDC66A2RUB6 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC66A2RUB6 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCDC66A2RUB6 AP000593.2-201ENST00000542775 1433 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms