Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AC061965.1-201ENST00000560524 1465 ntBASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AC073869.1-201ENST00000415574 2762 ntBASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AL359881.3-201ENST00000602640 1721 ntBASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AC234782.1-201ENST00000451950 919 ntBASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 MTND2P7-201ENST00000521337 640 ntBASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGC4Q9Y5F7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AC023794.5-201ENST00000564380 2157 ntBASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AL627231.1-201ENST00000394467 1125 ntBASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC25A15P3-201ENST00000505530 290 ntBASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 MIR3907-201ENST00000579424 151 ntBASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms