Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 FAM230B-204ENST00000421576 598 ntTSL 5 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 EEF1GP2-201ENST00000509352 1243 ntBASIC12.71□□□□□ -0.38
CHD8Q9HCK8 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 AC063924.1-201ENST00000546680 673 ntBASIC12.71□□□□□ -0.38
CHD8Q9HCK8 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 AC092535.4-201ENST00000609548 397 ntBASIC12.71□□□□□ -0.38
CHD8Q9HCK8 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 AC091951.1-201ENST00000512854 2465 ntBASIC12.71□□□□□ -0.38
CHD8Q9HCK8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.71□□□□□ -0.38
CHD8Q9HCK8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AC124319.4-201ENST00000622931 2161 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AL133517.1-201ENST00000413412 748 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AC006001.3-205ENST00000428370 579 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AC106782.3-201ENST00000563429 258 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AC109460.2-202ENST00000568057 573 ntTSL 3 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 RN7SL238P-201ENST00000613832 290 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 RN7SL106P-201ENST00000618104 290 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 EEF1GP3-201ENST00000421044 1288 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 MIR4689-201ENST00000582517 70 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AL357137.1-201ENST00000604645 203 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 AC013472.3-201ENST00000607407 659 ntBASIC12.7□□□□□ -0.38
CHD8Q9HCK8 PAUPAR-201ENST00000630360 2965 ntBASIC12.69□□□□□ -0.38
CHD8Q9HCK8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 RPL21P135-201ENST00000442539 791 ntBASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 RN7SL134P-201ENST00000579756 303 ntBASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CLPP-204ENST00000596149 745 ntTSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms