Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TMC1Q8TDI8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMC1Q8TDI8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC19.64■□□□□ 0.74
TMC1Q8TDI8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMC1Q8TDI8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
TMC1Q8TDI8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC19.64■□□□□ 0.74
TMC1Q8TDI8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 AL512306.1-201ENST00000432698 848 ntBASIC19.64■□□□□ 0.73
TMC1Q8TDI8 ERP29P1-201ENST00000442902 706 ntBASIC19.64■□□□□ 0.73
TMC1Q8TDI8 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 NDUFB10P1-201ENST00000567319 521 ntBASIC19.64■□□□□ 0.73
TMC1Q8TDI8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 AL359881.3-201ENST00000602640 1721 ntBASIC19.64■□□□□ 0.73
TMC1Q8TDI8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMC1Q8TDI8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 AC090643.2-201ENST00000623442 2029 ntBASIC19.63■□□□□ 0.73
TMC1Q8TDI8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 RN7SL665P-201ENST00000578793 300 ntBASIC19.63■□□□□ 0.73
TMC1Q8TDI8 MIR4649-201ENST00000582839 64 ntBASIC19.63■□□□□ 0.73
TMC1Q8TDI8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TMC1Q8TDI8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 GUSBP10-201ENST00000417412 665 ntBASIC19.62■□□□□ 0.73
TMC1Q8TDI8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC19.62■□□□□ 0.73
TMC1Q8TDI8 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms