Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
DNAAF1Q8NEP3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DNAAF1Q8NEP3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 RN7SL837P-201ENST00000463010 287 ntBASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 SLC25A47P1-201ENST00000531577 414 ntBASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 OR10B1P-201ENST00000601666 907 ntBASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 AL022328.1-201ENST00000610050 478 ntBASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 AC006453.4-201ENST00000636949 1252 ntBASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 MKRN5P-201ENST00000445263 1467 ntBASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DNAAF1Q8NEP3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms