Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AGAP12P-201ENST00000585227 2359 ntBASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AL137784.3-201ENST00000623858 2288 ntBASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 LINC01165-201ENST00000445190 1623 ntBASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 CHCHD2P2-201ENST00000503744 321 ntBASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 MIR3615-201ENST00000581999 87 ntBASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL3Q8IVW4 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDKL3Q8IVW4 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 DPM3-202ENST00000368399 517 ntBASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 ATP5G2P4-201ENST00000442175 420 ntBASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 AC005740.2-201ENST00000511085 419 ntBASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 FAM8A2P-201ENST00000528813 1142 ntBASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 AC013355.1-201ENST00000562625 723 ntBASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 AC093752.3-201ENST00000567343 901 ntBASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms