Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC025183.3-201ENST00000623526 1482 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 LINC00265-2P-201ENST00000413372 782 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC097065.1-201ENST00000425737 517 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 GRPEL2P1-201ENST00000453145 339 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC084752.1-201ENST00000509766 622 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 IGHV1-12-201ENST00000518307 205 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 MIR4265-201ENST00000582152 99 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC091769.1-201ENST00000619576 568 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 LINC00431-202ENST00000636375 159 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC068760.1-201ENST00000493579 1953 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.72■□□□□ 0.11
TRIM50Q86XT4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM50Q86XT4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 PDXDC2P-206ENST00000534700 1315 ntBASIC15.71■□□□□ 0.11
TRIM50Q86XT4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 AC092573.1-201ENST00000433054 884 ntBASIC15.71■□□□□ 0.11
TRIM50Q86XT4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 GOLGA2P8-201ENST00000505201 779 ntBASIC15.71■□□□□ 0.11
TRIM50Q86XT4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM50Q86XT4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM50Q86XT4 AC020910.6-201ENST00000623084 1459 ntBASIC15.71■□□□□ 0.1
TRIM50Q86XT4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.71■□□□□ 0.1
TRIM50Q86XT4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM50Q86XT4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM50Q86XT4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM50Q86XT4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM50Q86XT4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM50Q86XT4 TBC1D27-202ENST00000424239 1573 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms